2025
Venado RE, Wilker J, Pankievicz V, Infante V, MacIntyre A, Wolf E, Vela S, Robbins F, Fernandes-Júnior PI, Vermerris W, Ané JM. Mucilage produced by aerial roots hosts diazotrophs that provide nitrogen in Sorghum bicolor (2025) PLOS Biology (in press).
2024
Venkataraman M, Infante V, Sabat G, Sanos-Giles K, Ané JM, Pfleger BF. A novel membrane-associated protein aids bacterial colonization of maize (2024). ACS Synth Biol (in press).
Pereira WJ, Conde D, Perron N, Schmidt HW, Dervinis C, Venado RE, Ané JM, Kirst M. Investigating biological nitrogen fixation via single-cell transcriptomics (2024). Journal of Experimental Botany (in press).
Martinez-Feria R, Simmonds MB, Ozaydin B, Lewis S, Schwartz A, Pluchino A, McKellar M, Gottlieb SS, Kayatsky T, Vital R, Mehlman SE, Caron Z, Colaianni NR, Ané JM, Maeda J, Infante V, Karlsson BH, McLimans C, Vyn T, Hanson B, Verhagen G, Nevins C, Reese L, Otyama P, Robinson A, Learmonth T, Miller C, Havens K, Tamsir A, Temme K. Genetic remodeling of soil diazotrophs enables partial replacement of synthetic nitrogen fertilizer with biological nitrogen fixation in maize (2024). Scientific Reports (in press).
Kates H, O'Meara B, LaFrance R, Stull G, James E, Li S, Tian Q, Conde D, Kirst M, Ané JM, Soltis D, Guralnick R, Soltis P, Folk R, and Yi TS. Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants (2024). Nature Communications (in press).
Pereira WJ, Boyd J, Conde D, Triozzi PM, Balmant KM, Dervinis C, Schmidt HW, Boaventura-Novaes C, Chakraborty S, Knaack SA, Gao Y, Feltus FA, Roy S, Ané JM, Frugoli J, Kirst M. Single-Cell Transcriptome Program of Nodule Development Cellular Lineages in Medicago truncatula (2024). Cell Reports (in press).
Kloppenburg J, Calderón CI, Ané JM. The Nagoya Protocol and nitrogen fixing maize: Close encounters between Indigenous Oaxacans and the men from Mars (Inc.) (2024). Elementa: Science of the Anthropocene 12 (1): 00115. DOI: 10.1525/elementa.2023.00115
Ferrer-Orgaz S, Tiwari M, Isidra-Arellano M,; Pozas-Rodriguez E,; Vernie T, Rich M, Mbengue M, Formey D, Delaux PM,; Ané JM, Valdés-López O. Early Phosphorylated Protein 1 is required to activate the early rhizobial infection program (2024). New Phytologist 241(3):962-968. DOI: 10.1111/nph.19423
Pereira WJ, Conde D, Perron N, Schmidt HW, Dervinis C, Venado RE, Ané JM, Kirst M. Investigating biological nitrogen fixation via single-cell transcriptomics (2024). Journal of Experimental Botany (in press).
Martinez-Feria R, Simmonds MB, Ozaydin B, Lewis S, Schwartz A, Pluchino A, McKellar M, Gottlieb SS, Kayatsky T, Vital R, Mehlman SE, Caron Z, Colaianni NR, Ané JM, Maeda J, Infante V, Karlsson BH, McLimans C, Vyn T, Hanson B, Verhagen G, Nevins C, Reese L, Otyama P, Robinson A, Learmonth T, Miller C, Havens K, Tamsir A, Temme K. Genetic remodeling of soil diazotrophs enables partial replacement of synthetic nitrogen fertilizer with biological nitrogen fixation in maize (2024). Scientific Reports (in press).
Kates H, O'Meara B, LaFrance R, Stull G, James E, Li S, Tian Q, Conde D, Kirst M, Ané JM, Soltis D, Guralnick R, Soltis P, Folk R, and Yi TS. Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants (2024). Nature Communications (in press).
Pereira WJ, Boyd J, Conde D, Triozzi PM, Balmant KM, Dervinis C, Schmidt HW, Boaventura-Novaes C, Chakraborty S, Knaack SA, Gao Y, Feltus FA, Roy S, Ané JM, Frugoli J, Kirst M. Single-Cell Transcriptome Program of Nodule Development Cellular Lineages in Medicago truncatula (2024). Cell Reports (in press).
Kloppenburg J, Calderón CI, Ané JM. The Nagoya Protocol and nitrogen fixing maize: Close encounters between Indigenous Oaxacans and the men from Mars (Inc.) (2024). Elementa: Science of the Anthropocene 12 (1): 00115. DOI: 10.1525/elementa.2023.00115
Ferrer-Orgaz S, Tiwari M, Isidra-Arellano M,; Pozas-Rodriguez E,; Vernie T, Rich M, Mbengue M, Formey D, Delaux PM,; Ané JM, Valdés-López O. Early Phosphorylated Protein 1 is required to activate the early rhizobial infection program (2024). New Phytologist 241(3):962-968. DOI: 10.1111/nph.19423
2023

Wolf E, Vela S, Wilker J, Davis A, Robert M, Infante V, Venado R, Voiniciuc C, Ané JM, Vermerris W. Identification of genetic and environmental factors influencing aerial root traits that support biological nitrogen fixation in sorghum (2023). G3: Genes|Genomes|Genetics jkad285. DOI: 10.1093/g3journal/jkad285
Venkataraman M, Ynigez-Gutierrez A, Infante V, MacIntyre A, Fernandes-Júnior P, Ané JM, Pfleger B. A Synthetic Biology Toolbox for Nitrogen-Fixing Soil Microbes (2023). ACS Synthetic Biology 12, 3623–3634. DOI: 10.1021/acssynbio.3c00414
Meenaa MG, Lane MJ, Tannous J, Carrell AA, Abraham PE, Giannone RJ, Ané JM, Keller NP, Labbé JL, Kainer D, Jacobson DA, Rush TA. A glimpse into the fungal metabolomic abyss: Novel network analysis reveals relationships between exogenous compounds and their outputs (2023). PNAS Nexus 2 (10):pgad32. DOI: 10.1093/pnasnexus/pgad322
Keller-Pearson M, Bortolazzo A, Willems L, Smith B, Peterson A, Ané JM, Silva EM. A dual transcriptomic approach reveals contrasting patterns of differential gene expression during drought in arbuscular mycorrhizal fungus and carrot (2023). Molecular Plant-Microbe Interactions 36(12):821-832. DOI: 10.1094/MPMI-04-23-0038-R
Chakraborty S, Venkataraman M, Infante V, Pfleger B, Ané JM. Scripting a new dialogue between diazotrophs and crops (2023). Trends in Microbiology (in press). DOI: 10.1016/j.tim.2023.08.007
Van Gelder K, Oliveira-Filho ER, Messina CD, Venado RE, Wilker J, Rajasekar S, Ané JM, Amthor JS, Hanson AD. Running the numbers on plant synthetic biology solutions to global problems (2023). Plant Science 335:111815 DOI: 10.1016/j.plantsci.2023.111815
Adak A, Murray SC, Calderón CI, Infante V, Wilker J, Varela JI, Subramanian N, Isakeit T, Ané JM, Wallace J, De Leon N, Johnson C. Genetic Mapping and Prediction for Novel Lesion Mimic in Maize Demonstrates Quantitative Effects from Genetic Background, Environment and Epistasis (2023) Theoretical and Applied Genetics 136:155. DOI: 10.1007/s00122-023-04394-y
Bittleston L, Wolock C, Maeda J, Infante V, Ané JM, Pierce NE, Pringle A. Carnivorous Nepenthes pitchers with less acidic fluid house nitrogen-fixing bacteria (2023) Applied and Environmental Microbiology 89:7. DOI: 10.1128/aem.00812-23
Garcia K, Cloghessy K, Cooney DR, Shelley B, Chakraborty S, Kafle A, Busidan A, Sonawala U, Collier R, Jayaraman D, Ané JM, Pilot G. The putative transporter MtUMAMIT14 participates in nodule formation in Medicago truncatula. Scientific Reports 13:804, 2023. DOI: 10.1038/s41598-023-28160-8
Venkataraman M, Ynigez-Gutierrez A, Infante V, MacIntyre A, Fernandes-Júnior P, Ané JM, Pfleger B. A Synthetic Biology Toolbox for Nitrogen-Fixing Soil Microbes (2023). ACS Synthetic Biology 12, 3623–3634. DOI: 10.1021/acssynbio.3c00414
Meenaa MG, Lane MJ, Tannous J, Carrell AA, Abraham PE, Giannone RJ, Ané JM, Keller NP, Labbé JL, Kainer D, Jacobson DA, Rush TA. A glimpse into the fungal metabolomic abyss: Novel network analysis reveals relationships between exogenous compounds and their outputs (2023). PNAS Nexus 2 (10):pgad32. DOI: 10.1093/pnasnexus/pgad322
Keller-Pearson M, Bortolazzo A, Willems L, Smith B, Peterson A, Ané JM, Silva EM. A dual transcriptomic approach reveals contrasting patterns of differential gene expression during drought in arbuscular mycorrhizal fungus and carrot (2023). Molecular Plant-Microbe Interactions 36(12):821-832. DOI: 10.1094/MPMI-04-23-0038-R
Chakraborty S, Venkataraman M, Infante V, Pfleger B, Ané JM. Scripting a new dialogue between diazotrophs and crops (2023). Trends in Microbiology (in press). DOI: 10.1016/j.tim.2023.08.007
Van Gelder K, Oliveira-Filho ER, Messina CD, Venado RE, Wilker J, Rajasekar S, Ané JM, Amthor JS, Hanson AD. Running the numbers on plant synthetic biology solutions to global problems (2023). Plant Science 335:111815 DOI: 10.1016/j.plantsci.2023.111815
Adak A, Murray SC, Calderón CI, Infante V, Wilker J, Varela JI, Subramanian N, Isakeit T, Ané JM, Wallace J, De Leon N, Johnson C. Genetic Mapping and Prediction for Novel Lesion Mimic in Maize Demonstrates Quantitative Effects from Genetic Background, Environment and Epistasis (2023) Theoretical and Applied Genetics 136:155. DOI: 10.1007/s00122-023-04394-y
Bittleston L, Wolock C, Maeda J, Infante V, Ané JM, Pierce NE, Pringle A. Carnivorous Nepenthes pitchers with less acidic fluid house nitrogen-fixing bacteria (2023) Applied and Environmental Microbiology 89:7. DOI: 10.1128/aem.00812-23
Garcia K, Cloghessy K, Cooney DR, Shelley B, Chakraborty S, Kafle A, Busidan A, Sonawala U, Collier R, Jayaraman D, Ané JM, Pilot G. The putative transporter MtUMAMIT14 participates in nodule formation in Medicago truncatula. Scientific Reports 13:804, 2023. DOI: 10.1038/s41598-023-28160-8
2022
Rush T, Tannous J, Lane M, Meena MG, Carrell A, Golan J, Drott M, Cottaz S, Fort S, Ané JM, Keller N, Pelletier D, Jacobson D, Kainer D, Abraham P, Giannone R, Labbé J. Lipo-chitooligosaccharides induce specialized fungal metabolite profiles that modulate bacterial growth. mSystems 7(6) e01052-22, 2022. DOI: 10.1128/msystems.01052-22
Knaack SA, Conde D, Chakraborty S, Balmant K, Irving TB, Maia L, Triozzi P, Dervinis C, Pereira W, Maeda J, Schmidt H, Ané JM, Kirst M, Roy S. Temporal change in chromatin accessibility predicts regulators of nodulation in Medicago truncatula. BMC Biology 20, 252, 2022. DOI: 10.1186/s12915-022-01450-9
Irving T, Chakraborty S, Maia L, Knaack S, Rodriguez DC, Schmidt H, Triozzi P, Simmons C, Roy S, Kirst M, Ané JM. A lipochitooligosaccharide-responsive homolog of NIN positively regulates lateral root formation in Populus sp. Plant Physiology 190 (3) 1699–1714, 2022. DOI: 10.1093/plphys/kiac356
Pankievicz CVS, Delaux PM, Infante V, Hirsch HH, Rajasekar S, Zamora P, Jayaraman D, Calderon CI, Bennett A, Ané JM. Nitrogen fixation and mucilage production on maize aerial roots is controlled by aerial root development and border cell functions. Frontiers in Plant Science 13:977056, 2022. DOI: 10.3389/fpls.2022.977056
Chakraborty S, Valdés-López O, Stonoha-Arther C, Ané JM. Transcription factors controlling the rhizobium-legume symbiosis: integrating infection, organogenesis, and the abiotic environment. Plant and Cell Physiology 63(10) 1326–1343, 2022. DOI: 10.1093/pcp/pcac063
Pereira W, Knaack S, Chakraborty S, Conde D, Folk R, Triozzi P, Balmant K, Dervinis C, Schmidt H, Ané JM, Roy, S, Kirst M. Functional and comparative genomics reveals conserved noncoding sequences in the nitrogen-fixing clade. New Phytologist 234:634–649, 2022. DOI: 10.1111/nph.18006
Mus F, Khokhani D, MacIntyre AM, Rugoli E, Dixon R, Ané JM, Peters JW. Genetic determinants of ammonium excretion in nifL mutants of Azotobacter vinelandii. Applied and Environmental Microbiology 88 (6) e01876-21, 2022. DOI: 10.1128/aem.01876-21
Irving TB, Chakraborty S, Ivanov S, Schultze M, Mysore K, Harrison MJ, Ané JM. KIN3 impacts arbuscular mycorrhizal symbiosis and promotes fungal colonisation in Medicago truncatula. The Plant Journal 110,513–528, 2022. DOI: 10.1111/tpj.15685
Knaack SA, Conde D, Chakraborty S, Balmant K, Irving TB, Maia L, Triozzi P, Dervinis C, Pereira W, Maeda J, Schmidt H, Ané JM, Kirst M, Roy S. Temporal change in chromatin accessibility predicts regulators of nodulation in Medicago truncatula. BMC Biology 20, 252, 2022. DOI: 10.1186/s12915-022-01450-9
Irving T, Chakraborty S, Maia L, Knaack S, Rodriguez DC, Schmidt H, Triozzi P, Simmons C, Roy S, Kirst M, Ané JM. A lipochitooligosaccharide-responsive homolog of NIN positively regulates lateral root formation in Populus sp. Plant Physiology 190 (3) 1699–1714, 2022. DOI: 10.1093/plphys/kiac356
Pankievicz CVS, Delaux PM, Infante V, Hirsch HH, Rajasekar S, Zamora P, Jayaraman D, Calderon CI, Bennett A, Ané JM. Nitrogen fixation and mucilage production on maize aerial roots is controlled by aerial root development and border cell functions. Frontiers in Plant Science 13:977056, 2022. DOI: 10.3389/fpls.2022.977056
Chakraborty S, Valdés-López O, Stonoha-Arther C, Ané JM. Transcription factors controlling the rhizobium-legume symbiosis: integrating infection, organogenesis, and the abiotic environment. Plant and Cell Physiology 63(10) 1326–1343, 2022. DOI: 10.1093/pcp/pcac063
Pereira W, Knaack S, Chakraborty S, Conde D, Folk R, Triozzi P, Balmant K, Dervinis C, Schmidt H, Ané JM, Roy, S, Kirst M. Functional and comparative genomics reveals conserved noncoding sequences in the nitrogen-fixing clade. New Phytologist 234:634–649, 2022. DOI: 10.1111/nph.18006
Mus F, Khokhani D, MacIntyre AM, Rugoli E, Dixon R, Ané JM, Peters JW. Genetic determinants of ammonium excretion in nifL mutants of Azotobacter vinelandii. Applied and Environmental Microbiology 88 (6) e01876-21, 2022. DOI: 10.1128/aem.01876-21
Irving TB, Chakraborty S, Ivanov S, Schultze M, Mysore K, Harrison MJ, Ané JM. KIN3 impacts arbuscular mycorrhizal symbiosis and promotes fungal colonisation in Medicago truncatula. The Plant Journal 110,513–528, 2022. DOI: 10.1111/tpj.15685
Villalobos Solis MI, Engle NL, Spangle MK, Cottaz S, Fort S, Ané JM, Tschaplinski TJ, Labbé J, Hettich RL, Abraham PA, Rush TA. Expanding the biological role of lipo-chitooligosaccharides and chitooligosaccharides in Laccaria bicolor growth and development. Frontiers in Fungal Biology 3:808578, 2022. DOI: 10.3389/ffunb.2022.808578
Kleist TJ, Bortolazzo A, Keyser ZP, Perera AM, Irving TB, Venkateshwaran M, Atanjaoui F, Tang, RJ, Maeda J, Cartwright HN, Christianson ML, Lemaux PG, Luan S, Ané JM. Stress-associated developmental reprogramming in moss protonemata by synthetic activation of the common symbiosis pathway. iScience 25(2) 103754, 2022. DOI: 10.1016/j.isci.2022.103754 Triozzi PM, Irving TB, Schmidt HW, Keyser ZP, Chakraborty S, Balmant K, Pereira.WJ, Dervinis C, Mysore KS, Wen J, Ané JM, Kirst M, Conde D. Spatiotemporal cytokinin response imaging and ISOPENTENYLTRANSFERASE 3 function in Medicago nodule development. Plant Physiology 188(1) 560–575, 2022. DOI: 10.1093/plphys/kiab447 |
2021
Wen A,Havens K, Bloch S, Shah N, Higgins D, Davis-Richardson A, Sharon J, Rezaei F, Mohiti-Asli M, Johnson A, Abud G, Ané JM, Maeda J, Infante V, Gottlieb S, Lorigan J, Williams L, McKellar M, Horton A, Sorian, D, Caron Z,; Elzinga H, Graham, Ashley C R, Mak SM, Stupin L, Robinson A, Hubbard N, Broglie R, Tamsir A, Temme K. Enabling Biological Nitrogen Fixation for Cereal Crops in Fertilized Fields. ACS Synthetic Biology 10(12) 3264–3277, 2021. DOI: 10.1021/acssynbio.1c00049
Irving TB, Alptekin B, Kleven B, Ané JM. A critical review of 25 years of glomalin research: a better mechanical understanding and robust quantification techniques are required. New Phytologist. 232 (4) 1572-1581, 2021. DOI: 10.1111/nph.17713
Khokhani D, Carrera Carriel C, Vayla S, Irving TB, Stonoha-Arther C, Keller NP, Ané JM. Deciphering the Chitin Code in Plant Symbiosis, Defense, and Microbial Networks. Annual Review in Microbiology. 75:583-607, 2021. DOI: 10.1146/annurev-micro-051921-114809
Pankievicz VCS, do Amaral FP, Ané JM, Stacey G. Diazotrophic Bacteria and their Mechanisms to Interact and Benefit Cereals. Molecular Plant Microbe Interactions. 34 (5) 491–498, 2021. DOI: 10.1094/MPMI-11-20-0316-FI
Cope KR, Irving TB, Chakraborty S, Ané JM. Perception of lipo-chitooligosaccharides by the bioenergy crop Populus. Plant Signaling Behavior. 16(6):1903758, 2021. DOI: 10.1080/15592324.2021.1903758
Ribeiro VHV, Maia LSG, Arneson NJ, Oliveira MC, Read HW, Ané JM, dos Santos JB, Werle R. Influence of PRE-Emergence Herbicides on Soybean Development, Root Nodulation and Symbiotic Nitrogen Fixation. Crop Protection. 144:105576, 2021. DOI: 10.1016/j.cropro.2021.105576
Shin J, Marx H, Richards A, Vaneechoutte D, Jayaraman D, Maeda J, Chakraborty S, Sussman M, Vandepoele K, Ané JM, Coon J, Roy SA. Network-based comparative framework to study conservation and divergence of proteomes in plant phylogenies. Nucleic Acids Research. 49(1):e3, 2021. DOI: 10.1093/nar/gkaa1041
Irving TB, Alptekin B, Kleven B, Ané JM. A critical review of 25 years of glomalin research: a better mechanical understanding and robust quantification techniques are required. New Phytologist. 232 (4) 1572-1581, 2021. DOI: 10.1111/nph.17713
Khokhani D, Carrera Carriel C, Vayla S, Irving TB, Stonoha-Arther C, Keller NP, Ané JM. Deciphering the Chitin Code in Plant Symbiosis, Defense, and Microbial Networks. Annual Review in Microbiology. 75:583-607, 2021. DOI: 10.1146/annurev-micro-051921-114809
Pankievicz VCS, do Amaral FP, Ané JM, Stacey G. Diazotrophic Bacteria and their Mechanisms to Interact and Benefit Cereals. Molecular Plant Microbe Interactions. 34 (5) 491–498, 2021. DOI: 10.1094/MPMI-11-20-0316-FI
Cope KR, Irving TB, Chakraborty S, Ané JM. Perception of lipo-chitooligosaccharides by the bioenergy crop Populus. Plant Signaling Behavior. 16(6):1903758, 2021. DOI: 10.1080/15592324.2021.1903758
Ribeiro VHV, Maia LSG, Arneson NJ, Oliveira MC, Read HW, Ané JM, dos Santos JB, Werle R. Influence of PRE-Emergence Herbicides on Soybean Development, Root Nodulation and Symbiotic Nitrogen Fixation. Crop Protection. 144:105576, 2021. DOI: 10.1016/j.cropro.2021.105576
Shin J, Marx H, Richards A, Vaneechoutte D, Jayaraman D, Maeda J, Chakraborty S, Sussman M, Vandepoele K, Ané JM, Coon J, Roy SA. Network-based comparative framework to study conservation and divergence of proteomes in plant phylogenies. Nucleic Acids Research. 49(1):e3, 2021. DOI: 10.1093/nar/gkaa1041
2020

Rush TA, Puech-Pagès V, Bascaules A, Jargeat P, Maillet F, Haouy A, Maës AQ, Carrera Carriel C, Khokhani D, Keller-Pearson M, Tannous J, Cope KR, Garcia K, Maeda J, Johnson C, Kleven B, Choudhury QJ, Labbé J, Swift C, O’Malley MA, Bok JW, Cottaz S, Fort S, Poinsot V, Sussman MR, Lefort C, Nett J, Keller NP, Bécard G, Ané JM. Lipo-chitooligosaccharides as regulatory signals of fungal growth and development. Nature Communications. 11: 3897, 2020. DOI: 10.1038/s41467-020-17615-5
Bennett A, Pankievicz VCS, Ané JM. A model for nitrogen fixation in cereal crops. Trends in Plant Sciences. 25 (3): 226-235, 2020. DOI:10.1016/j.tplants.2019.12.004
Chamberlain L, Lund-Bolton M, Cox M, Suen G, Conley, S, Ané JM. Crop rotation, but not cover crops, influenced soil bacterial community composition in a corn-soybean system in southern Wisconsin. Applied Soil Ecology. 154: 103603, 2020. DOI:10.1016/j.apsoil.2020.103603
Schenck CA, Westphal J, Jayaraman D, Garcia K, Ané JM, Sumner L, Maeda HA. Role of Cytosolic, Tyrosine-Insensitive Prephenate Dehydrogenase in Medicago truncatula. Plant Direct. 4:1–15, 2020. DOI:10.1002/pld3.218
Paudel D, Liu F, Wang L, Crook M, Maya S, Peng Z, Kelley K, Ané JM, Wang J. Isolation, characterization, and complete genome sequence of a Bradyrhizobium strain Lb8 from nodules of peanut utilizing crack entry infection. Frontiers in Microbiology. 11:93, 2020. DOI: 10.3389/fmicb.2020.00093
Keller-Pearson M, Liu Y, Peterson A, Pederson K, Willems L, Ané JM, Silva EM. Inoculation with arbuscular mycorrhizal fungi has a more significant positive impact on the growth of open-pollinated heirloom varieties of carrots than on hybrid cultivars under organic management conditions. Agriculture, Ecosystems & Environment. 289:106712, 2020. DOI:10.1016/j.agee.2019.106712
Bennett A, Pankievicz VCS, Ané JM. A model for nitrogen fixation in cereal crops. Trends in Plant Sciences. 25 (3): 226-235, 2020. DOI:10.1016/j.tplants.2019.12.004
Chamberlain L, Lund-Bolton M, Cox M, Suen G, Conley, S, Ané JM. Crop rotation, but not cover crops, influenced soil bacterial community composition in a corn-soybean system in southern Wisconsin. Applied Soil Ecology. 154: 103603, 2020. DOI:10.1016/j.apsoil.2020.103603
Schenck CA, Westphal J, Jayaraman D, Garcia K, Ané JM, Sumner L, Maeda HA. Role of Cytosolic, Tyrosine-Insensitive Prephenate Dehydrogenase in Medicago truncatula. Plant Direct. 4:1–15, 2020. DOI:10.1002/pld3.218
Paudel D, Liu F, Wang L, Crook M, Maya S, Peng Z, Kelley K, Ané JM, Wang J. Isolation, characterization, and complete genome sequence of a Bradyrhizobium strain Lb8 from nodules of peanut utilizing crack entry infection. Frontiers in Microbiology. 11:93, 2020. DOI: 10.3389/fmicb.2020.00093
Keller-Pearson M, Liu Y, Peterson A, Pederson K, Willems L, Ané JM, Silva EM. Inoculation with arbuscular mycorrhizal fungi has a more significant positive impact on the growth of open-pollinated heirloom varieties of carrots than on hybrid cultivars under organic management conditions. Agriculture, Ecosystems & Environment. 289:106712, 2020. DOI:10.1016/j.agee.2019.106712
2019
Ryu MH, Zhang J, Toth T, Khokhani D, Geddes B, Mus F, Garcia Costas A, Peters J, Poole P, Ané JM, Voigt C. Control of nitrogen fixation in bacteria that associate with cereals. Nature Microbiology. 5, 314–330, 2019. DOI:10.1038/s41564-019-0631-2
Pankievicz VCS, Irving TB, Maia LGS, Ané JM. Are we there yet? The long walk towards the development of efficient symbiotic associations between nitrogen-fixing bacteria and non-leguminous crops. BMC Biology 17(1):99, 2019. DOI: 10.1186/s12915-019-0710-0 Kim S, Zeng W, Bernard S, Liao J, Venkateshwaran M, Ané JM, Jiang Y. Ca2+-regulated Ca2+ channels with an RCK gating ring control plant symbiotic associations. Nature Communications 10(1):3703, 2019. DOI: 10.1038/s41467-019-11698-5 Cope KR, Bascaules A, Irving TB, Venkateshwaran M, Maeda J, Garcia K, Rush T, Ma C, Labbé J, Jawdy S, Steigerwald E, Setzke J, Fung E, Schnell K, Wang Y, Schlief N, Bücking H, Strauss SH, Jargeat P, Bécard G, Puech-Pagès V, Ané JM. The ectomycorrhizal fungus Laccaria bicolor produces lipochitooligosaccharides and uses the common symbiosis pathway to colonize Populus. The Plant Cell 31: 2386–2410, 2019. DOI: 10.1105/tpc.18.00676 |
Labbé J, Muchero W, Czarnecki O, Wang J, Wang X, Bryan AC, Zheng K, Yang Y, Xie M, Zhang J, Wang D, Meidl P, Morrell-Falvey JL, Cope K, Maia L, Ané JM, Mewalal R, Jawdy SS, Gunter LE, Schackwitz W, Martin J, Le Tacon F, Li T, Zhang Z, Ranjan P, Lindquist E, Yang X, Jacobson DA, Tschaplinski TJ, Barry K, Schmutz J, Chen JG, Tuskan GA. Mediation of plant-mycorrhizal interaction by a lectin receptor-like kinase. Nature Plants 5: 676–680, 2019. DOI: 10.1038/s41477-019-0469-x
Wahlig TA, Bixler BJ, Valdés-López O, Mysore KS, Wen J, Ané JM, Kaspar CW. Salmonella enterica serovar Typhimurium ATCC 14028S is tolerant to plant defenses triggered by the flagellin receptor FLS2. FEMS Microbiology Letters 366(4), 2019. DOI:10.1093/femsle/fny296
Jayaraman D, Venkateshwaran M, Ané JM. Leveraging proteome and phosphoproteome to unravel the molecular mechanisms of legume-rhizobia symbiosis. Book chapter 12.12.2 in The Model Legume Medicago truncatula. Pages 1081-1086, 2019. Ed. FJ de Bruijn. Wiley-Blackwell. ISBN: 978-1-119-40917-5.
Valdés-López O, Jayaraman D, Maeda J, Delaux PM, Venkateshwaran M, Isidra-Arellano MC, del Rocío Reyero-Saavedra M, del Socorro Sánchez-Correa M, Verastegui-Vidal MA, Delgado-Buenrostro N, Van Ness L, Mysore KS, Wen J, Sussman MR, Ané JM. A Novel Positive Regulator of the Early Stages of the Root Nodule Symbiosis Identified by Phosphoproteomics. Plant and Cell Physiology, 60(3): 575–586, 2019. DOI:10.1093/pcp/pcy228
Labbé J, Muchero W, Czarnecki O, Wang J, Wang X, Bryan AC, Zheng K, Yang Y, Xie M, Zhang J, Wang D, Meidl P, Morrell-Falvey JL, Cope K, Maia L, Ané JM, Mewalal R, Jawdy SS, Gunter LE, Schackwitz W, Martin J, Le Tacon F, Li T, Zhang Z, Ranjan P, Lindquist E, Yang X, Jacobson DA, Tschaplinski TJ, Barry K, Schmutz J, Chen JG, Tuskan GA. Mediation of plant-mycorrhizal interaction by a lectin receptor-like kinase. Nature Plants 5: 676–680, 2019. DOI: 10.1038/s41477-019-0469-x
Wahlig TA, Bixler BJ, Valdés-López O, Mysore KS, Wen J, Ané JM, Kaspar CW. Salmonella enterica serovar Typhimurium ATCC 14028S is tolerant to plant defenses triggered by the flagellin receptor FLS2. FEMS Microbiology Letters 366(4), 2019. DOI:10.1093/femsle/fny296
Jayaraman D, Venkateshwaran M, Ané JM. Leveraging proteome and phosphoproteome to unravel the molecular mechanisms of legume-rhizobia symbiosis. Book chapter 12.12.2 in The Model Legume Medicago truncatula. Pages 1081-1086, 2019. Ed. FJ de Bruijn. Wiley-Blackwell. ISBN: 978-1-119-40917-5.
Valdés-López O, Jayaraman D, Maeda J, Delaux PM, Venkateshwaran M, Isidra-Arellano MC, del Rocío Reyero-Saavedra M, del Socorro Sánchez-Correa M, Verastegui-Vidal MA, Delgado-Buenrostro N, Van Ness L, Mysore KS, Wen J, Sussman MR, Ané JM. A Novel Positive Regulator of the Early Stages of the Root Nodule Symbiosis Identified by Phosphoproteomics. Plant and Cell Physiology, 60(3): 575–586, 2019. DOI:10.1093/pcp/pcy228
2018
Lund ME, Mourtzinis S, Conley SP, Ané JM. Soybean Cyst Nematode Control with Pasteuria nishizawae Under Different Management Practices. Agronomy Journal 110 (6) 2534-2540, 2018. DOI:10.2134/agronj2018.05.0314
Van Deynze A, Zamora P, Delaux PM, Heitmann C, Jayaraman D, Rajasekar S, Graham D, Maeda J, Gibson D, Schwartz KD, Berry AM, Bhatnagar S, Jospin G, Darling A, Jeannotte R, Lopez J, Weimer BC, Eisen. JA, Shapiro HY, Ané JM, Bennett AB. Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota. PLoS Biology 16(8): e2006352, 2018. DOI: 10.1371/journal.pbio.2006352
Van Deynze A, Zamora P, Delaux PM, Heitmann C, Jayaraman D, Rajasekar S, Graham D, Maeda J, Gibson D, Schwartz KD, Berry AM, Bhatnagar S, Jospin G, Darling A, Jeannotte R, Lopez J, Weimer BC, Eisen. JA, Shapiro HY, Ané JM, Bennett AB. Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota. PLoS Biology 16(8): e2006352, 2018. DOI: 10.1371/journal.pbio.2006352
Keller C, Maeda J, Jayaraman D, Chakraborty S, Sussman MR, Harris J, Ané JM, Li L. Comparison of Vacuum MALDI and AP-MALDI Platforms for the Mass Spectrometry Imaging of Metabolites Involved in Salt Stress in Medicago truncatula. Frontiers in Plant Science 9:1238, 2018. DOI=10.3389/fpls.2018.01238
Griesmann M, Chang Y, Liu X, Song Y, Haberer G, Crook MB, Billault-Penneteau B, Lauressergues D, Keller J, Imanishi L, Roswanjaya Y P, Kohlen W, Pujic P, Battenberg K, Alloisio N, Liang Y, Hilhorst H, Salgado MG, Hocher V, Gherbi H, Svistoonoff S, Doyle JJ, He S, Xu Y, Xu S, Qu J, Gao Q, Fang X, Fu Y, Normand P, Berry AM, Wall LG, Ané JM, Pawlowski K, Xu X, Yang H, Spannagl M, Mayer KFX, Wong GKS, Parniske M, Delaux PM, and Cheng, S. Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis. Science 361(6398), 2018. DOI: 10.1126/science.aat1743
Marburger D, Willbur JF, Weber ME, Ané JM, Kabbage M, Conley SP, Smith DL. Characterizing the Effect of Foliar Lipo-chitooligosaccharide Application on Sudden Death Syndrome and Sclerotinia Stem Rot in Soybean. Plant Health Progress 19:46-53, 2018. DOI:10.1094/PHP-10-17-0058-RS
2017
Ranjan A, Jayaraman D, Grau C, Hill J, Whitham SA, Ané JM, Smith DL, Kabbage M. The pathogenic development of Sclerotinia sclerotiorum in soybean requires specific host NADPH oxidases. Molecular Plant Pathology 19(3) 700-714, 2017. DOI: 10.1111/mpp.12555.
Jayaraman D, Richards A, Westphall M, Coon JJ, Ané JM. Identification of the phosphorylation targets of symbiotic receptor-like kinases using a high-throughput multiplexed assay for kinase specificity. The Plant Journal 90(6), 1196–1207, 2017. DOI: 10.1111/tpj.13529
Garcia K, Ané JM. Polymorphic responses of Medicago truncatula accessions to potassium deprivation. Plant Signaling & Behavior 12(4), 2017. DOI: 10.1080/15592324.2017.1307494
Garcia K, Chasman D, Roy S, Ané JM. Physiological responses and gene co-expression network of mycorrhizal roots under K+ deprivation. Plant Physiology 173(3):1811-1823, 2017. DOI: https://doi.org/10.1104/pp.16.01959
Kamel L, Keller-Pearson M, Roux C, Ané JM. Biology and Evolution of Arbuscular Mycorrhizal Symbiosis in the Light of Genomics. New Phytologist, 213:531–536, 2017 DOI: 10.1111/nph.14263
Jayaraman D, Richards A, Westphall M, Coon JJ, Ané JM. Identification of the phosphorylation targets of symbiotic receptor-like kinases using a high-throughput multiplexed assay for kinase specificity. The Plant Journal 90(6), 1196–1207, 2017. DOI: 10.1111/tpj.13529
Garcia K, Ané JM. Polymorphic responses of Medicago truncatula accessions to potassium deprivation. Plant Signaling & Behavior 12(4), 2017. DOI: 10.1080/15592324.2017.1307494
Garcia K, Chasman D, Roy S, Ané JM. Physiological responses and gene co-expression network of mycorrhizal roots under K+ deprivation. Plant Physiology 173(3):1811-1823, 2017. DOI: https://doi.org/10.1104/pp.16.01959
Kamel L, Keller-Pearson M, Roux C, Ané JM. Biology and Evolution of Arbuscular Mycorrhizal Symbiosis in the Light of Genomics. New Phytologist, 213:531–536, 2017 DOI: 10.1111/nph.14263
2016
Gemperline E, Keller C, Jayaraman D, Maeda J, Sussman MR, Ané JM, Li L. Examination of Endogenous Peptides in Medicago truncatula using Mass Spectrometry Imaging. Journal of Proteome Research, 15, 12, 4403–4411, 2016. DOI: 10.1021/acs.jproteome.6b0047
Palmer AG, Mukherjee A, Stacy DM, Lazar S, Ané JM, Blackwell HE. Interkingdom responses to bacterial quorum sensing signals regulate frequency and rate of nodulation in the legume-rhizobia symbiosis. ChemBioChem 17(22): 2199–2205, 2016. DOI: 10.1002/cbic.201600373 Mitra S, Mukherjee A, Wiley-Kalil A, Das S, Owen H, Reddy PM, Ané JM, James EK, Gyaneshwar P. A rhamnose-deficient lipopolysaccharide mutant of Rhizobium sp. IRBG74 is defective in root colonization and beneficial interactions with its flooding-tolerant hosts Sesbania cannabina and wetland rice. Journal of Experimental Botany 67 (19): 5869-5884, 2016. DOI: 10.1093/jxb/erw354 Garcia K, Ané JM. Commentary on "Comparative Analysis of Secretomes from Ectomycorrhizal Fungi with an Emphasis on Small-Secreted Proteins". Frontiers in Plant Science, 7: 1734, 2016. DOI: 10.3389/fmicb.2016.01734 Poinsot V, Crook M, Erdn S, Maillet F, Bascaules A, Ané JM. New insights into Nod factor biosynthesis: Analyses of chitooligomers and lipo-chitooligomers of Rhizobium sp. IRBG74 mutants. Carbohydrate Research. 434, 83–93, 2016. DOI: 10.1016/j.carres.2016.08.001 Marx H, Minogue CE, Jayaraman D, Richards AL, Kwiecien NW, Sihapirani AF, Rajasekar S, Maeda J, Garcia K, Del Valle-Echevarria AR, Volkening J, Westphall MS, Roy S, Sussman MR, Ané JM, Coon JJ. A Proteomic Atlas of the Legume, Medicago truncatula, and its Nitrogen-Fixing Endosymbiont, Sinorhizobium meliloti. Nature Biotechnology. 34, 1198–1205, 2016. DOI: 10.1038/nbt.3681 Van Ness L, Jayaraman D, Maeda J, Barrett-Wilt GA, Sussman MR, Ané JM. Mass spectrometric-based selected reaction monitoring of protein phosphorylation during symbiotic signaling in the model legume, Medicago truncatula. PLoS ONE . 11(5): e0155460, 2016. DOI: 10.1371/journal.pone.0155460 Mus F, Crook M, Garcia K, Garcia-Costas A, Geddes B, Kouri ED, Paramasivan P, Ryu MH, Oldroyd GED, Poole P, Udvardi M, Voigt CA, Ané JM, Peters J. Symbiotic Nitrogen Fixation and Challenges to Extending it to Non-Legumes. Applied and Environmental Microbiology. 82(13): 3698–3710, 2016. DOI: 10.1128/AEM.01055-16 |
2015
Delaux PM, Radhakrishnan GV, Jayaraman D, Cheemah J, Malbreil M, Volkening JD, Sekimoto H, Nishiyama T, Melkonian M, Pokorny L, Rothfels CJ, Winter-Sederoff H, Stevenson DW, Surek B, Zhang Y, Sussman MR, Dunand C, Morris RJ, Roux C, Wong GKS, Oldroyd GED, Ané JM. The algal ancestor of land plants was pre-adapted for symbiosis. Proceedings of the National Academy of Sciences USA. 112 (43) 13390–13395, 2015. DOI: 10.1073/pnas.1515426112
Garcia K, Delaux PM, Cope K, Ané JM. Molecular signals required for the establishment and maintenance of ectomycorrhizal symbioses. New Phytologist. 208, 79-87, 2015. DOI: 10.1111/nph.13423 Venkateshwaran M, Jayaraman D, Chabaud M, Genre A, Balloon AJ, Maeda J, Forshey K, Den Os D, Kwiecien NW, Coon JJ, Barker DG, Ané JM. A role for the mevalonate pathway in early plant symbiotic signaling. Proceedings of the National Academy of Sciences USA. 112 (31), 9781-9786, 2015. DOI: 10.1073/pnas.1413762112 Nguyen TT, Volkening JD, Rose CM, Venkateshwaran M, Westphall MS, Coon JJ, Ané JM, and Sussman MR. Potential regulatory phosphorylation sites in a Medicago truncatula plasma membrane proton pump implicated during early symbiotic signaling in roots. FEBS Letters. 589 (17), 2186-2193, 2015. DOI: 10.1016/j.febslet.2015.06.035 Patron N, Orzaez D, Marillonnet S, Warzecha H, Matthewman C, Youles M, Raitskin O, Leveau A, Farre-Martinez G, Rogers C, Smith A, Hibberd J, Webb A, Locke J, Schornack S, Ajioka J, Baulcombe D, Zipfel C, Kamoun S, Jones J, Kuhn H, Robatzek S, Van Esse HP, Oldroyd GED, Sanders D, Martin C, Field R, O'Connor S, Fox S, Wulff B, Miller B, Breakspear A, Radhakrishnan G, Delaux PM, Loque D, Granell A, Tissier A, Shih P, Brutnell T, Quick P, Rischer H, Fraser P, Aharoni A, Raines C, South P, Ané JM, Hamberger B, Langdale J, Stougaard J, Bouwmeester H, Udvardi M, Murray J, Ntoukakis V, Schafer P, Denby K, Edwards K, Osbourn A, Haseloff J. Standards for Plant Synthetic Biology: A Common Syntax for Exchange of DNA Parts. New Phytologist. 208 (1), 13-19, 2015. DOI: 10.1111/nph.13532 Knack JJ, Wilcox LW, Delaux PM, Ané JM, Piotrowski MJ, Cook ME, Graham JM, Graham LE. Microbiomes of Streptophyte Algae and Bryophytes Suggest that a Functional Suite of Microbiota Fostered Plant Colonization of Land. International Journal of Plant Sciences. 76 (5) 405-420, 2015. DOI: 10.1086/681161 Sun J, Miller JB, Granqvist E, Wiley-Kalil A, Gobbato E, Maillet F, Cottaz S, Samain E, Venkateshwaran M, Fort S, Morris RJ, Ané JM, Dénarié J, Oldroyd GED. Activation of symbiosis signalling by arbuscular mycorrhizal fungi in legumes and rice. The Plant Cell 27 (3), 823-838, 2015. DOI: 10.1105/tpc.114.131326 Marburger DA, Conley SP, Esker PD, Lauer JG, Ané JM. Yield Response to Crop/Genotype Rotations and Fungicide Use to Manage Fusarium-Related Diseases. Crop Science. 55 (2), 889-898, 2015. DOI: 10.2135/cropsci2014.03.0201 Gemperline E, Jayaraman D, Maeda J, Ané JM, Li L. Multifaceted Investigation of Metabolites During Nitrogen Fixation in Medicago via High Resolution MALDI-MS Imaging and ESI-MS. Journal of The American Society for Mass Spectrometry. 26(1):149-58, 2015. DOI: 10.1007/s13361-014-1010-0 Marburger DA, Venkateshwaran M, Conley SP, Esker PD, Lauer JG, Ané JM. Crop Rotation and Management Effect on Fusarium spp. Populations. Crop Science. 55:365–376, 2015. DOI: 10.2135/cropsci2014.03.0199 |
2014
Palmer A, Senechal A, Mukherjee A, Ané JM, Blackwell H. Plant Responses to Bacterial N-Acyl L-Homoserine Lactones are Dependent on Enzymatic Degradation to L-Homoserine. ACS Chemical Biology 9: 1834-1845, 2014. DOI: 10.1021/cb500191a
Delaux PM. Varala K, Edger PP, Coruzzi GM, Pires JC, Ané JM. Comparative Phylogenomics Uncovers the Impact of Symbiotic Associations on Host Genome Evolution. PLoS Genetics, 10(7) e1004487, 2014. DOI: 10.1371/journal.pgen.1004487
Delaux PM. Varala K, Edger PP, Coruzzi GM, Pires JC, Ané JM. Comparative Phylogenomics Uncovers the Impact of Symbiotic Associations on Host Genome Evolution. PLoS Genetics, 10(7) e1004487, 2014. DOI: 10.1371/journal.pgen.1004487
Barthelemy-Delaux C, Marburger D, Delaux PM, Conley S, Ané JM. Effect of Drought on Bradyrhizobium japonicum Populations in Midwest Soils. Plant and Soil, 382: 165-173, 2014. DOI: 10.1007/s11104-014-2155-0
Jayaraman D, Gilroy S, Ané JM. Staying in touch: mechanical signals in plant-microbe interactions. Current Opinion in Plant Biology, 20:104–109, 2014. DOI: 10.1016/j.pbi.2014.05.003
Jayaraman D, Valdés-López O, Kaspar CW, Ané JM. Response of Medicago truncatula seedlings to colonization by Salmonella enterica and Escherichia coli O157:H7. PLoS ONE, 9 (2), e87970, 2014. DOI: 10.1371/journal.pone.0087970
2013
Crook M, Mitra S, Ané JM, Sadowsky MJ, Prasad G. The Complete Genome Sequence of the Sesbania Symbiont and Rice Growth Promoting Endophyte Rhizobium sp. Strain IRBG74. Genome Announcements,1(6)e00934-13, 2013. DOI: 10.1128/genomeA.00934-13
Delaux PM, Séjalon-Delmas N, Bécard G, Ané JM. Evolution of the plant – microbe symbiotic “toolkit”. Trends in Plants Sciences, 18(6), 298-304, 2013. DOI: 10.1016/j.tplants.2013.01.008
Ye VH, Gemperline E, Venkateshwaran M, Chen R, Delaux PM, Howes-Podoll M, Ané JM, Li L. MALDI mass spectrometry (MS)-assisted molecular imaging of metabolites during nitrogen fixation in the Medicago truncatula – Sinorhizobium meliloti symbiosis. The Plant Journal, 75(1) 130-145, 2013. DOI: 10.1111/tpj.12191
Venkateshwaran M, Volkening JD, Sussman MR, Ané JM. Symbiosis and the Social Network of Higher Plants. Current Opinion in Plant Biology, 16(1), 118-127, 2013. DOI: 10.1016/j.pbi.2012.11.007
Delaux PM, Séjalon-Delmas N, Bécard G, Ané JM. Evolution of the plant – microbe symbiotic “toolkit”. Trends in Plants Sciences, 18(6), 298-304, 2013. DOI: 10.1016/j.tplants.2013.01.008
Ye VH, Gemperline E, Venkateshwaran M, Chen R, Delaux PM, Howes-Podoll M, Ané JM, Li L. MALDI mass spectrometry (MS)-assisted molecular imaging of metabolites during nitrogen fixation in the Medicago truncatula – Sinorhizobium meliloti symbiosis. The Plant Journal, 75(1) 130-145, 2013. DOI: 10.1111/tpj.12191
Venkateshwaran M, Volkening JD, Sussman MR, Ané JM. Symbiosis and the Social Network of Higher Plants. Current Opinion in Plant Biology, 16(1), 118-127, 2013. DOI: 10.1016/j.pbi.2012.11.007
2012
Volkening JD, Bailey DJ, Rose CM, Grimsrud PA, Howes-Podoll M, Venkateshwaran M, Westphall MS, Ané JM, Coon JJ, Sussman MR. A proteogenomic survey of the Medicago truncatula genome. Molecular and Cellular Proteomics, 11(10), 933-44, 2012. DOI: 10.1074/mcp.M112.019471
Venkateshwaran M, Cosme A, Han L, Banba M, Satyshur KA, Schleiff E, Parniske M, Imaizumi-Anraku H, Ané JM. Recent evolution of a symbiotic ion channel in the legume family altered ion conductance and improved functionality in calcium signaling. The Plant Cell, 24 (6) 2528-45, 2012. DOI: 10.1105/tpc.112.098475
Zhang N, Venkateshwaran M, Harms A, Howes-Podoll M, den Os D, Ané JM, Sussman MR. Metabolomic Profiling Reveals Suppression of Oxylipin Biosynthesis during the Early Stages of Legume-Rhizobia Symbiosis. FEBS letters, 586(19), 3150-8, 2012. DOI: 10.1016/j.febslet.2012.06.046
Rose CM, Venkateshwaran M,Volkening JD, Grimsrud PA, Maeda J, Bailey DJ, Park K, Howes-Podoll M, den Os D, Yeun LH, Westphall MS, Sussman MR, Ané JM*, Coon JJ*. Rapid phosphoproteomic and transcriptomic changes in the rhizobia-legume symbiosis. Molecular and Cellular Proteomics, 11(9), 724-44, 2012. DOI: 10.1074/mcp.M112.019208
Rose CM, Venkateshwaran M, Grimsrud PA, Westphall MS, Sussman MR, Coon JJ, Ané JM. Medicago PhosphoProtein Database: a repository for Medicago truncatula phosphoprotein data. Frontiers in Plant Science, 3:122, 2012. DOI: 10.3389/fpls.2012.00122
Furseth BJ, Conley SP, Ané JM. Soybean Response to Soil Rhizobia and Seed-applied Rhizobia Inoculants in Wisconsin. Crop Science. 52(1), 339-344, 2012. DOI: 10.2135/cropsci2011.01.0041
Jayaraman D, Forshey KL, Grimsrud PA, Ané JM, Leveraging proteomics to understand plant-microbe interactions. Frontiers in Plant Science. 3:44, 2012. DOI: 10.3389/fpls.2012.00044
Venkateshwaran M, Cosme A, Han L, Banba M, Satyshur KA, Schleiff E, Parniske M, Imaizumi-Anraku H, Ané JM. Recent evolution of a symbiotic ion channel in the legume family altered ion conductance and improved functionality in calcium signaling. The Plant Cell, 24 (6) 2528-45, 2012. DOI: 10.1105/tpc.112.098475
Zhang N, Venkateshwaran M, Harms A, Howes-Podoll M, den Os D, Ané JM, Sussman MR. Metabolomic Profiling Reveals Suppression of Oxylipin Biosynthesis during the Early Stages of Legume-Rhizobia Symbiosis. FEBS letters, 586(19), 3150-8, 2012. DOI: 10.1016/j.febslet.2012.06.046
Rose CM, Venkateshwaran M,Volkening JD, Grimsrud PA, Maeda J, Bailey DJ, Park K, Howes-Podoll M, den Os D, Yeun LH, Westphall MS, Sussman MR, Ané JM*, Coon JJ*. Rapid phosphoproteomic and transcriptomic changes in the rhizobia-legume symbiosis. Molecular and Cellular Proteomics, 11(9), 724-44, 2012. DOI: 10.1074/mcp.M112.019208
Rose CM, Venkateshwaran M, Grimsrud PA, Westphall MS, Sussman MR, Coon JJ, Ané JM. Medicago PhosphoProtein Database: a repository for Medicago truncatula phosphoprotein data. Frontiers in Plant Science, 3:122, 2012. DOI: 10.3389/fpls.2012.00122
Furseth BJ, Conley SP, Ané JM. Soybean Response to Soil Rhizobia and Seed-applied Rhizobia Inoculants in Wisconsin. Crop Science. 52(1), 339-344, 2012. DOI: 10.2135/cropsci2011.01.0041
Jayaraman D, Forshey KL, Grimsrud PA, Ané JM, Leveraging proteomics to understand plant-microbe interactions. Frontiers in Plant Science. 3:44, 2012. DOI: 10.3389/fpls.2012.00044
2011
Capoen W, Sun J, Wysham D, Otegui MS, Venkateshwaran M, Hirsch S, Miwa H, Downie JA, Morris RJ, Ané JM, Oldroyd GED. The nuclear membranes control symbiotic calcium signalling of legumes. Proceedings of the National Academy of Sciences USA, 108(34), 14348-14353, 2011. DOI: 10.1073/pnas.1107912108
Horváth B, Yeun LH, Domonkos A, Halász G, Gobbato E, Ayaydin F, Míró K, Hirsch S, Sun J, Tadege M, Ratet P, Mysore K, Ané JM, Oldroyd GED, Kaló P. Medicago truncatula IPD3 is a member of the common symbiotic signaling pathway required for rhizobial and mycorrhizal symbioses. Molecular Plant-Microbe Interactions, 24 (11), 1345-1358, 2011. DOI: 10.1094/MPMI-01-11-0015 Furseth BJ, Conley SP, Ané JM. Soybean Response to Rhizobia on Previously Flooded Sites in Southern Wisconsin. Agronomy Journal, 103:573-576, 2011. DOI: 10.2134/agronj2010.0393 Riely BK, He H, Venkateshwaran M, Sarma B, Schraiber J, Ané JM, Cook DR. Identification of legume RopGEF gene families and characterization of a Medicago truncatula RopGEF mediating polar growth of root hairs. The Plant Journal, 65:230-243, 2011. DOI: 10.1111/j.1365-313X.2010.04414.x Mukherjee A, Ané JM. Germinated spore exudates from arbuscular mycorrhizal fungi: molecular and developmental responses in higher land plants and their regulation by ethylene. Molecular Plant-Microbe Interactions, 24:2, 260-270, 2011. DOI: 10.1094/MPMI-06-10-0146 Venkateshwaran M, Ané JM. Legumes and nitrogen fixation: Physiological, molecular, evolutionary perspective and applications. In: The Molecular Basis of Nutrient Use Efficiency in Crops, (eds Hawkesford MJ and Barraclough PB), John Wiley & Sons, Inc., Hoboken, NJ, USA. pp 457-489. ISBN: 978-0-8138-1992-1, 2011. DOI: 10.1002/9780470960707.ch20 Mukherjee A and Ané JM. Plant Hormones and Initiation of Legume Nodulation and Arbuscular Mycorrhization, in Ecological Aspects of Nitrogen Metabolism in Plants (eds J. C. Polacco and C. D. Todd), John Wiley & Sons, Inc., Hoboken, NJ, USA. pp 354-396, 2011. DOI: 10.1002/9780470959404.ch16 |
2010
Furseth BJ, Conley SP, Ané JM. Enumeration of Soybean-Associated Rhizobia with Quantitative Real-Time Polymerase Chain Reaction. Crop Science. 50:2591-2596, 2010. DOI: 10.2135/cropsci2010.03.0141
Goodrich-Blair H, Ané JM, Bever JD, Bordenstein S, Bright M, Chaston JM, Clay K, Currie CR, Douglas AE, Gerardo N, Harrison MJ, Ley RE, McFall-Ngai M, Mukherjee A, Rader B, Raffa KF, Ruby EG, Saffo MB, Selosse MA, Sonnenburg JL, Stock SP, Suen G, Turnau K, Udvardi M, Visick KL, Weis V. Symbiosis research, technology, and education: Proceedings of the 6th International Symbiosis Society Congress held in Madison Wisconsin, USA, August 2009, Symbiosis. 51: 1-12, 2010. DOI: 10.1007/s13199-010-0076-0 Wang B, Yeun LH, Xue J , Liu Y, Ané JM, Qiu YL. Presence of three mycorrhizal genes in the common ancestor of land plants suggests a key role of mycorrhizas in the colonization of land by plants, New Phytologist. 186, 514-525, 2010. DOI: 10.1111/j.1469-8137.2009.03137.x Grimsrud PA, den Os D, Wenger CD, Schwartz D, Sussman MR, Ané JM, Coon J. Large-scale analysis of protein phosphorylation in Medicago truncatula roots, Plant Physiology. 152: 19-28, 2010. DOI: 10.1104/pp.109.149625 |
2009
Bhaskar, BP, Venkateshwaran M, Wu, L, Ané JM, Jiang, J. Agrobacterium-mediated transient gene expression and silencing in potato, PLoS ONE 4(6): e5812, 2009. DOI: 10.1371/journal.pone.0005812
2008
Chen C, Ané JM, Zhu H. Os-IPD3, an ortholog of the Medicago truncatula DMI3 interacting protein IPD3, is required for mycorrhizal symbiosis in rice. New Phytologist. 180: 311-315, 2008. DOI: 10.1111/j.1469-8137.2008.02612.x
Brelles-Mariño G, Ané JM. Nod factors and the molecular dialogue in the rhizobia - legume interaction. In: Nitrogen Fixation Research Progress. 173-227, Editor: GN Couto. Nova Science Publishers, Inc. ISBN: 978-1-60456-402-0, 2008
Ané JM, Zhu H, Frugoli J. Recent advances in Medicago truncatula genomics. International Journal of Plant Genomics. vol. 2008, Article ID 256597, 2008. DOI: 10.1155/2008/256597
Venkateshwaran M, Riely BK, Peiter E, Otegui MS, Sun J, Heckmann A, Lougnon G, Edwards A, Freshour G, Hahn MG, Sanders D, Oldroyd GED., Downie JA., Cook DR, Ané JM. The putative ion channel DMI1 localizes to the nuclear envelope and regulates nuclear calcium spiking during early symbiotic signaling. Phytopathology. 98:S163-S163, 2008.
Kevei Z, Lougnon G, Mergaert P, Horváth GV, Kereszt A, Jayaraman D, Zaman N, Marcela F, Regulski K, Kiss GB, Kondorosi A, Endre G, Kondorosi E, Ané JM. A 3-hydroxy-3-methylglutaryl coenzyme A reductase interacts with NORK in the nodulation signaling pathway. The Plant Cell. 9:3974-3989, 2008. DOI: 10.1105/tpc.107.053975
Brelles-Mariño G, Ané JM. Nod factors and the molecular dialogue in the rhizobia - legume interaction. In: Nitrogen Fixation Research Progress. 173-227, Editor: GN Couto. Nova Science Publishers, Inc. ISBN: 978-1-60456-402-0, 2008
Ané JM, Zhu H, Frugoli J. Recent advances in Medicago truncatula genomics. International Journal of Plant Genomics. vol. 2008, Article ID 256597, 2008. DOI: 10.1155/2008/256597
Venkateshwaran M, Riely BK, Peiter E, Otegui MS, Sun J, Heckmann A, Lougnon G, Edwards A, Freshour G, Hahn MG, Sanders D, Oldroyd GED., Downie JA., Cook DR, Ané JM. The putative ion channel DMI1 localizes to the nuclear envelope and regulates nuclear calcium spiking during early symbiotic signaling. Phytopathology. 98:S163-S163, 2008.
Kevei Z, Lougnon G, Mergaert P, Horváth GV, Kereszt A, Jayaraman D, Zaman N, Marcela F, Regulski K, Kiss GB, Kondorosi A, Endre G, Kondorosi E, Ané JM. A 3-hydroxy-3-methylglutaryl coenzyme A reductase interacts with NORK in the nodulation signaling pathway. The Plant Cell. 9:3974-3989, 2008. DOI: 10.1105/tpc.107.053975
2007
Peiter E, Sun J, Heckmann AB, Venkateshwaran M, Riley BK, Otegui MS, Edwards A, Freshour G, Hahn MG, Cook DR, Sanders D, Oldroyd GED, Downie JA, Ané JM. The Medicago truncatula DMI1 protein modulates cytosolic calcium signaling. Plant Physiology. 145(1): 192–203, 2007. DOI: 10.1104/pp.107.097261
Riely BK, Messinese E, Mun JH, Yeun LH, Jayaraman D, Venkateshwaran M, Lougnon G, Rougé P, Barre A, Bono JJ, Cook, DR, Ané JM. The nucleus as a central player in symbiotic signaling . Biology of Plant-Microbe Interactions (Volume 6). E. Sanchez. International Society for Molecular Plant Microbe Interactions, 2007. ISBN 978-0-9654625-5-6
Messinese E, Mun JH, Yeun LH, Jayaraman D, Rougé P, Barre A, Lougnon G, Schornack S, Bono JJ, Cook DR, Ané JM. A novel nuclear protein interacts with the symbiotic DMI3 CCaMK of Medicago truncatula. Molecular Plant-Microbe Interactions. 20 (8): 912-921, 2007. DOI: 10.1094/MPMI-20-8-0912
Riely BK, Lougnon G, Ané JM, Cook DR. The symbiotic ion channel homolog DMI1 functions in the nuclear membrane of Medicago truncatula roots. The Plant Journal. 49 (2): 208–216, 2007. DOI: 10.1111/j.1365-313X.2006.02957.x
Riely BK, Messinese E, Mun JH, Yeun LH, Jayaraman D, Venkateshwaran M, Lougnon G, Rougé P, Barre A, Bono JJ, Cook, DR, Ané JM. The nucleus as a central player in symbiotic signaling . Biology of Plant-Microbe Interactions (Volume 6). E. Sanchez. International Society for Molecular Plant Microbe Interactions, 2007. ISBN 978-0-9654625-5-6
Messinese E, Mun JH, Yeun LH, Jayaraman D, Rougé P, Barre A, Lougnon G, Schornack S, Bono JJ, Cook DR, Ané JM. A novel nuclear protein interacts with the symbiotic DMI3 CCaMK of Medicago truncatula. Molecular Plant-Microbe Interactions. 20 (8): 912-921, 2007. DOI: 10.1094/MPMI-20-8-0912
Riely BK, Lougnon G, Ané JM, Cook DR. The symbiotic ion channel homolog DMI1 functions in the nuclear membrane of Medicago truncatula roots. The Plant Journal. 49 (2): 208–216, 2007. DOI: 10.1111/j.1365-313X.2006.02957.x
2006
Riely BK, Mun JH, Ané JM. Unravelling the molecular basis for symbiotic signal transduction in legumes. Molecular Plant Pathology. 7(3):197-207, 2006. DOI: 10.1111/j.1364-3703.2006.00328.x
Zhu H, Riely BK, Burns NJ, Ané JM. Tracing non-legume orthologs of legume genes required for nodulation and arbuscular mycorrhizal symbioses. Genetics. 172:2491-2499, 2006. DOI: 10.1534/genetics.105.051185
Zhu H, Riely BK, Burns NJ, Ané JM. Tracing non-legume orthologs of legume genes required for nodulation and arbuscular mycorrhizal symbioses. Genetics. 172:2491-2499, 2006. DOI: 10.1534/genetics.105.051185
2005
Debellé F, Bres C, Lévy J, Ben Amor B, Arrighi JF, Maillet F, Ané JM, Rosenberg C, Dénarié, J, Shaw S, Oldroyd GED, Long S, Penmetsa RV, Cook DR, Geurts R, Bisseling T, Duc G, Gough C. Genetic and Molecular Analysis of Nod Factor Signalling in Medicago truncatula. In Biological Nitrogen Fixation, Sustainable Agriculture and the Environment, Y.P. Wang, M. Lin, Z.X. Tian, C. Elmerich, and W. Newton, eds (Springer Netherlands), pp. 165-168, 2005. DOI: 10.1007/1-4020-3570-5_39
2004
Riely BK, Ané JM, Penmetsa RV, Cook DR. Genetic and genomic analysis in model legumes bring Nod factor signaling to center stage. Current Opinion in Plant Biology. 7(4): 408-13, 2004. DOI: 10.1016/j.pbi.2004.04.005
Lévy J, Bres C, Geurts R, Chalhoub B, Kulikova O, Duc G, Journet EP, Ané JM, Lauber E, Bisseling T, Dénarié J, Rosenberg C, Debellé F. A putative Ca2+ and calmodulin-dependent protein kinase required for bacterial and fungal symbioses. Science. 303 (5662): 1361-4, 2004. DOI: 10.1126/science.1093038
Ané JM, Kiss GB, Riely BK, Penmetsa RV, Oldroyd GED, Ayax C, Lévy J, Debellé F, Baek JM, Kaló P, Rosenberg C, Roe BA, Long SR, Dénarié J, Cook DR. Medicago truncatula DMI1 required for bacterial and fungal symbioses in legumes. Science. 303 (5662): 1364-7, 2004. DOI:
10.1126/science.1092986
Lévy J, Bres C, Geurts R, Chalhoub B, Kulikova O, Duc G, Journet EP, Ané JM, Lauber E, Bisseling T, Dénarié J, Rosenberg C, Debellé F. A putative Ca2+ and calmodulin-dependent protein kinase required for bacterial and fungal symbioses. Science. 303 (5662): 1361-4, 2004. DOI: 10.1126/science.1093038
Ané JM, Kiss GB, Riely BK, Penmetsa RV, Oldroyd GED, Ayax C, Lévy J, Debellé F, Baek JM, Kaló P, Rosenberg C, Roe BA, Long SR, Dénarié J, Cook DR. Medicago truncatula DMI1 required for bacterial and fungal symbioses in legumes. Science. 303 (5662): 1364-7, 2004. DOI:
10.1126/science.1092986
2002
Ané JM, Lévy J, Thoquet P, Kulikova O, de Billy F, Penmetsa V, Kim DJ, Debellé F, Rosenberg C, Cook DR, Bisseling T, Huguet T, Dénarié J. Genetic and cytogenetic mapping of DMI1, DMI2, and DMI3 genes of Medicago truncatula involved in Nod factor transduction, nodulation, and mycorrhization. Molecular Plant-microbe Interactions. 15(11): 1108-18, 2002. DOI: 10.1094/MPMI.2002.15.11.1108
Thoquet P, Ghérardi M, Journet EP, Kereszt A, Ané JM, Prospéri JM, Huguet T. The molecular genetic linkage map of the model legume Medicago truncatula: an essential tool for comparative legume genomics and the isolation of agronomically important genes. BMC Plant Biology. 2(1): 1, 2002. DOI: 10.1186/1471-2229-2-1
Thoquet P, Ghérardi M, Journet EP, Kereszt A, Ané JM, Prospéri JM, Huguet T. The molecular genetic linkage map of the model legume Medicago truncatula: an essential tool for comparative legume genomics and the isolation of agronomically important genes. BMC Plant Biology. 2(1): 1, 2002. DOI: 10.1186/1471-2229-2-1